If it's the same issue, then as Wolfy said,
"I pulled the clutch basket and idler gear and used about 2 cans of the cheapest carb cleaner and sprayed the heck out of the all the internals, especially where the start shaft runs into the transmission cavity. I really sprayed in there, and kept the bike kilter to the left a little and drained everything into my wifes baking pan. As soon as I didn't see anymore bits coming out, I put everything back together.
I have since put about 350-400 miles on the bike and changed the oil after every 100. I haven't seen any flakes.
Hopefully its the same scenario for you, so you don't have to tear that bugger down."
Basically, remove the drain plug and oil screen from the lower right. Tilt the engine to the left (kickstand). Spray WD-40, brake cleaner, or any other safe cleaning solution into the transmission housing through the hole where the kickstart spring is (try to avid hitting any bearings with the brake cleaner).
When you are ready to drain the liquid, tilt the engine to the right and catch anything coming out in some sort of pan. Inspect the results and repeat as needed.
Just remember, since the drain plug goes into the transmission housing, any magnetic floating particles nearby will eventually become stuck there. And, it may take a few flushes to get "everything" out of the cavity. Hope this helps... thank Wolfy.